SHOGoiN Cell Transcriptome: GSM1080204

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080204


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7010000000000000000000-771Sequence Read ArchiveSRP018525SRP018525_T7Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome4-cell embryo cell (4-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 129.1431
2 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 76.9358
3 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 73.7977
4 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 64.2901
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 64.0153
6 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 55.2924
7 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 32.5527
8 ENSMUSG00000100862 Gm10925 predicted gene 10925 25.0078
9 ENSMUSG00000101249 Gm29216 predicted gene 29216 23.9951
10 ENSMUSG00000100131 Gm28439 predicted gene 28439 23.2653

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108167 Olfr1386 olfactory receptor 1386 -0.0648
46623 ENSMUSG00000108164 Gm43899 predicted gene, 43899 -0.0648
46622 ENSMUSG00000108161 Gm32914 predicted gene, 32914 -0.0648
46621 ENSMUSG00000108158 Gm44002 predicted gene, 44002 -0.0648
46620 ENSMUSG00000108157 Olrf445-ps1 olfactory receptor 445, pseudogene 1 -0.0648
46619 ENSMUSG00000108156 Olfr326-ps1 olfactory receptor 326, pseudogene 1 -0.0648
46618 ENSMUSG00000108155 Gm44443 predicted gene, 44443 -0.0648
46617 ENSMUSG00000108154 Gm44033 predicted gene, 44033 -0.0648
46616 ENSMUSG00000108153 Gm44402 predicted gene, 44402 -0.0648
46615 ENSMUSG00000108152 Gm44152 predicted gene, 44152 -0.0648

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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