SHOGoiN Cell Transcriptome: GSM1080205

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080205


Profile download
7010000000000000000000-771Sequence Read ArchiveSRP018525SRP018525_T8Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome4-cell embryo cell (4-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 127.0376
2 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 94.4605
3 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 61.8720
4 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 60.5233
5 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 47.3124
6 ENSMUSG00000100862 Gm10925 predicted gene 10925 41.7222
7 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 36.8726
8 ENSMUSG00000064357 mt-Atp6 mitochondrially encoded ATP synthase 6 34.5955
9 ENSMUSG00000102070 Gm28661 predicted gene 28661 29.4232
10 ENSMUSG00000064354 mt-Co2 mitochondrially encoded cytochrome c oxidase II 29.1122

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108132 Gm44175 predicted gene, 44175 -0.0815
46623 ENSMUSG00000108131 Gm44099 predicted gene, 44099 -0.0815
46622 ENSMUSG00000108130 Gm30781 predicted gene, 30781 -0.0815
46621 ENSMUSG00000108129 4930417O13Rik RIKEN cDNA 4930417O13 gene -0.0815
46620 ENSMUSG00000108128 4922502N22Rik RIKEN cDNA 4922502N22 gene -0.0815
46619 ENSMUSG00000108126 Gm43909 predicted gene, 43909 -0.0815
46618 ENSMUSG00000108125 Gm17812 predicted gene, 17812 -0.0815
46617 ENSMUSG00000108124 Gm44146 predicted gene, 44146 -0.0815
46616 ENSMUSG00000108123 Gm43884 predicted gene, 43884 -0.0815
46615 ENSMUSG00000108119 Gm43891 predicted gene, 43891 -0.0815

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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