SHOGoiN Cell Transcriptome: GSM1080206

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080206


Profile download
7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T9Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 85.1028
2 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 76.2617
3 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 71.7204
4 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 70.8077
5 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 57.6102
6 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 51.2539
7 ENSMUSG00000100862 Gm10925 predicted gene 10925 35.1476
8 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 28.8607
9 ENSMUSG00000064357 mt-Atp6 mitochondrially encoded ATP synthase 6 28.6254
10 ENSMUSG00000034391 Fbxo15 F-box protein 15 24.9594

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108190 Gm44731 predicted gene 44731 -0.1080
46623 ENSMUSG00000108189 Gm43887 predicted gene, 43887 -0.1080
46622 ENSMUSG00000108187 4930511E03Rik RIKEN cDNA 4930511E03 gene -0.1080
46621 ENSMUSG00000108186 Gm8132 predicted gene 8132 -0.1080
46620 ENSMUSG00000108184 Gm44198 predicted gene, 44198 -0.1080
46619 ENSMUSG00000108180 Gm44141 predicted gene, 44141 -0.1080
46618 ENSMUSG00000108179 Gm44274 predicted gene, 44274 -0.1080
46617 ENSMUSG00000108176 Gm43965 predicted gene, 43965 -0.1080
46616 ENSMUSG00000108175 Gm16499 predicted gene 16499 -0.1080
46615 ENSMUSG00000108174 Gm44092 predicted gene, 44092 -0.1080

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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