SHOGoiN Cell Transcriptome: GSM1080207

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080207


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T10Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 87.4626
2 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 87.4119
3 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 80.4911
4 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 70.8226
5 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 60.2788
6 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 54.2769
7 ENSMUSG00000100862 Gm10925 predicted gene 10925 33.4845
8 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 29.2254
9 ENSMUSG00000064357 mt-Atp6 mitochondrially encoded ATP synthase 6 27.4232
10 ENSMUSG00000102070 Gm28661 predicted gene 28661 20.8221

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108190 Gm44731 predicted gene 44731 -0.0937
46623 ENSMUSG00000108189 Gm43887 predicted gene, 43887 -0.0937
46622 ENSMUSG00000108188 Gm43865 predicted gene, 43865 -0.0937
46621 ENSMUSG00000108187 4930511E03Rik RIKEN cDNA 4930511E03 gene -0.0937
46620 ENSMUSG00000108186 Gm8132 predicted gene 8132 -0.0937
46619 ENSMUSG00000108184 Gm44198 predicted gene, 44198 -0.0937
46618 ENSMUSG00000108181 C030015A19Rik RIKEN cDNA C030015A19 gene -0.0937
46617 ENSMUSG00000108180 Gm44141 predicted gene, 44141 -0.0937
46616 ENSMUSG00000108179 Gm44274 predicted gene, 44274 -0.0937
46615 ENSMUSG00000108176 Gm43965 predicted gene, 43965 -0.0937

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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