SHOGoiN Cell Transcriptome: GSM1080208

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080208


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T11Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 127.1394
2 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 73.9162
3 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 71.5302
4 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 66.6942
5 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 64.4296
6 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 46.6940
7 ENSMUSG00000100862 Gm10925 predicted gene 10925 26.1689
8 ENSMUSG00000101249 Gm29216 predicted gene 29216 24.8750
9 ENSMUSG00000100131 Gm28439 predicted gene 28439 24.0713
10 ENSMUSG00000064357 mt-Atp6 mitochondrially encoded ATP synthase 6 21.3242

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108206 Gm44427 predicted gene, 44427 -0.0859
46623 ENSMUSG00000108205 Gm19252 predicted gene, 19252 -0.0859
46622 ENSMUSG00000108203 Gm43944 predicted gene, 43944 -0.0859
46621 ENSMUSG00000108200 Gm43931 predicted gene, 43931 -0.0859
46620 ENSMUSG00000108198 Gm44823 predicted gene 44823 -0.0859
46619 ENSMUSG00000108197 Gm44214 predicted gene, 44214 -0.0859
46618 ENSMUSG00000108196 Gm36328 predicted gene, 36328 -0.0859
46617 ENSMUSG00000108195 Gm44415 predicted gene, 44415 -0.0859
46616 ENSMUSG00000108193 Olfr442-ps1 olfactory receptor 442, pseudogene 1 -0.0859
46615 ENSMUSG00000108192 Gm44410 predicted gene, 44410 -0.0859

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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