SHOGoiN Cell Transcriptome: GSM1080210

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080210


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7010000000000000000000-773Sequence Read ArchiveSRP018525SRP018525_T13Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptomeMorula cell (Morula)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000037742 Eef1a1 eukaryotic translation elongation factor 1 alpha 1 50.2115
2 ENSMUSG00000015656 Hspa8 heat shock protein 8 50.0107
3 ENSMUSG00000057113 Npm1 nucleophosmin 1 46.8210
4 ENSMUSG00000023944 Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 44.8181
5 ENSMUSG00000067274 Rplp0 ribosomal protein, large, P0 43.4141
6 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 41.5920
7 ENSMUSG00000026246 Alppl2 alkaline phosphatase, placental-like 2 40.1898
8 ENSMUSG00000020372 Rack1 receptor for activated C kinase 1 39.9591
9 ENSMUSG00000011179 Odc1 ornithine decarboxylase, structural 1 39.1905
10 ENSMUSG00000031812 Map1lc3b microtubule-associated protein 1 light chain 3 beta 37.0434

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54524 ENSMUSG00000117331 exocrine gland-secreting peptide pseudogene -0.1222
54523 ENSMUSG00000117330 ribosomal protein L18A (Rpl18a) pseudogene -0.1222
54522 ENSMUSG00000117329 zinc finger protein 541 (Zfp541) pseudogene -0.1222
54521 ENSMUSG00000117328 novel transcript, antisense to Smoc2 -0.1222
54520 ENSMUSG00000117326 zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene -0.1222
54519 ENSMUSG00000117325 Opa interacting protein 5 (Oip5) pseudogene -0.1222
54518 ENSMUSG00000117324 novel transcript, antisense to Dscam -0.1222
54517 ENSMUSG00000117323 novel transcript -0.1222
54516 ENSMUSG00000117322 novel transcript, antisense to Zfp213 -0.1222
54515 ENSMUSG00000117321 ribosomal protein S27 (Rps27) pseudogene -0.1222

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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