SHOGoiN Cell Transcriptome: GSM1160112

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160112


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5030206000000000000000-761Sequence Read ArchiveSRP018525SRP018525_T16Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptomeSecondary oocyteHumanGenitaliaRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000164611 PTTG1 pituitary tumor-transforming 1 94.9722
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 82.4911
3 ENSG00000187569 DPPA3 developmental pluripotency associated 3 77.4514
4 ENSG00000132646 PCNA proliferating cell nuclear antigen 76.7594
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 75.9387
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 50.0567
7 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 46.7487
8 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 37.3513
9 ENSG00000261812 TUBB8P7 tubulin beta 8 class VIII pseudogene 7 36.4206
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 35.7746

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0527
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0527
58733 ENSG00000285992 novel transcript -0.0527
58732 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0527
58731 ENSG00000285989 TEC -0.0527
58730 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0527
58729 ENSG00000285987 NA -0.0527
58728 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0527
58727 ENSG00000285985 NA -0.0527
58726 ENSG00000285984 novel transcript -0.0527

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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