SHOGoiN Cell Transcriptome: GSM1160113

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160113


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5030206000000000000000-761Sequence Read ArchiveSRP018525SRP018525_T17Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptomeSecondary oocyteHumanGenitaliaRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 117.0620
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 96.4610
3 ENSG00000214788 OOSP1 oocyte secreted protein 1 (pseudogene) 90.4415
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 72.0737
5 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 70.4032
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 62.7606
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 61.0639
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 43.5046
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 41.9245
10 ENSG00000261812 TUBB8P7 tubulin beta 8 class VIII pseudogene 7 30.9128

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000276795 NA -0.0456
57166 ENSG00000276791 NA -0.0456
57165 ENSG00000276790 NA -0.0456
57164 ENSG00000276789 NA -0.0456
57163 ENSG00000276788 SNORD26 small nucleolar RNA, C/D box 26 -0.0456
57162 ENSG00000276786 NA -0.0456
10 ENSG00000261812 TUBB8P7 tubulin beta 8 class VIII pseudogene 7 30.9128
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 41.9245
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 43.5046
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 61.0639

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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