SHOGoiN Cell Transcriptome: GSM1160116

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160116


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7010000000000000000000-769Sequence Read ArchiveSRP018525SRP018525_T20Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptomeTwo-pronuclear zygoteHumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 120.5139
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 113.0494
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 79.1964
4 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 64.6261
5 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 59.8818
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 51.4866
7 ENSG00000214788 OOSP1 oocyte secreted protein 1 (pseudogene) 44.1731
8 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 43.8029
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 39.0807
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 32.8982

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000276241 NA -0.0629
57168 ENSG00000276240 OR4E1 olfactory receptor family 4 subfamily E member 1 (gene/pseudogene) -0.0629
57164 ENSG00000276233 NA -0.0629
57163 ENSG00000276232 NA -0.0629
57162 ENSG00000276231 PIK3R6 phosphoinositide-3-kinase regulatory subunit 6 -0.0629
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 32.8982
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 39.0807
8 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 43.8029
7 ENSG00000214788 OOSP1 oocyte secreted protein 1 (pseudogene) 44.1731
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 51.4866

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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