SHOGoiN Cell Transcriptome: GSM1160118

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160118


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7010000000000000000000-769Sequence Read ArchiveSRP018525SRP018525_T22Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptomeZygote (Zygote)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 122.8791
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 93.9889
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 78.2554
4 ENSG00000214788 OOSP1 oocyte secreted protein 1 (pseudogene) 76.7733
5 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 60.9171
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 47.0843
7 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 44.3586
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.1368
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 33.8617
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 31.1588

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276409 CCL14 C-C motif chemokine ligand 14 -0.0667
57170 ENSG00000276407 NA -0.0667
57169 ENSG00000276406 NA -0.0667
57168 ENSG00000276405 TRBV13 T cell receptor beta variable 13 -0.0667
57167 ENSG00000276404 MIR6835 microRNA 6835 -0.0667
57164 ENSG00000276400 VN1R9P vomeronasal 1 receptor 9 pseudogene -0.0667
57163 ENSG00000276398 NA -0.0667
57162 ENSG00000276397 LINC01879 long intergenic non-protein coding RNA 1879 -0.0667
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 31.1588
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 33.8617

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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