SHOGoiN Cell Transcriptome: GSM1160120

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160120


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7010000000000000000000-770Sequence Read ArchiveSRP018525SRP018525_T24Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome2-cell embryo cell (2-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 121.9495
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 106.6907
3 ENSG00000214788 OOSP1 oocyte secreted protein 1 (pseudogene) 73.1531
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 52.3633
5 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 51.9034
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 49.8297
7 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 49.4356
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 45.9725
9 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 40.0634
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 37.3466

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000276656 MIR6083 microRNA 6083 -0.0683
57169 ENSG00000276653 RN7SL856P RNA, 7SL, cytoplasmic 856, pseudogene -0.0683
57167 ENSG00000276651 NA -0.0683
57166 ENSG00000276650 NA -0.0683
57164 ENSG00000276647 KRTAP12-6P keratin associated protein 12-6, pseudogene -0.0683
57163 ENSG00000276645 NA -0.0683
57162 ENSG00000276643 NA -0.0683
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 37.3466
9 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 40.0634
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 45.9725

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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