SHOGoiN Cell Transcriptome: GSM1160121

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160121


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7010000000000000000000-770Sequence Read ArchiveSRP018525SRP018525_T25Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome2-cell embryo cell (2-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 130.8627
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 108.1970
3 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 67.1123
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 59.9165
5 ENSG00000214788 OOSP1 oocyte secreted protein 1 (pseudogene) 58.0172
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 54.6048
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 49.2939
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 47.4723
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 41.1563
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 40.1053

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276823 NA -0.0457
57170 ENSG00000276822 NA -0.0457
57169 ENSG00000276819 TRBV15 T cell receptor beta variable 15 -0.0457
57165 ENSG00000276814 NA -0.0457
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 40.1053
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 41.1563
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 47.4723
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 49.2939
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 54.6048
5 ENSG00000214788 OOSP1 oocyte secreted protein 1 (pseudogene) 58.0172

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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