SHOGoiN Cell Transcriptome: GSM1160122

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160122


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7010000000000000000000-770Sequence Read ArchiveSRP018525SRP018525_T26Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome2-cell embryo cell (2-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 145.8294
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 103.5578
3 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 76.7306
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 66.0284
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 48.9359
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 47.0048
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 46.8485
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 36.9704
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 36.0413
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 33.3312

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276788 SNORD26 small nucleolar RNA, C/D box 26 -0.0420
57170 ENSG00000276786 NA -0.0420
57169 ENSG00000276784 NA -0.0420
57167 ENSG00000276782 NA -0.0420
57166 ENSG00000276775 IGHV4-4 immunoglobulin heavy variable 4-4 -0.0420
57164 ENSG00000276772 NA -0.0420
57163 ENSG00000276771 NA -0.0420
57162 ENSG00000276770 MIR6780B microRNA 6780b -0.0420
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 33.3312
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 36.0413

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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