SHOGoiN Cell Transcriptome: GSM1160122

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160122


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7010000000000000000000-770Sequence Read ArchiveSRP018525SRP018525_T26Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome2-cell embryo cell (2-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 143.9228
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 100.9188
3 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 76.6512
4 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 60.4330
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 48.9598
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 45.1936
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 41.1087
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 37.4861
9 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 36.9128
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 33.1631

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0417
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0417
58733 ENSG00000285992 novel transcript -0.0417
58732 ENSG00000285991 novel transcript -0.0417
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0417
58730 ENSG00000285989 TEC -0.0417
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0417
58728 ENSG00000285987 NA -0.0417
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0417
58726 ENSG00000285985 NA -0.0417

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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