SHOGoiN Cell Transcriptome: GSM1160123

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160123


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7010000000000000000000-771Sequence Read ArchiveSRP018525SRP018525_T27Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome4-cell embryo cell (4-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 148.9010
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 125.6791
3 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 57.8721
4 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 56.0495
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 52.3024
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 51.2860
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 46.6933
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.9272
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 38.0229
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 25.0467

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276669 NA -0.0405
57170 ENSG00000276668 NA -0.0405
57168 ENSG00000276664 NA -0.0405
57167 ENSG00000276662 NA -0.0405
57164 ENSG00000276656 MIR6083 microRNA 6083 -0.0405
57163 ENSG00000276653 RN7SL856P RNA, 7SL, cytoplasmic 856, pseudogene -0.0405
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 25.0467
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 38.0229
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.9272
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 46.6933

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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