SHOGoiN Cell Transcriptome: GSM1160124

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160124


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7010000000000000000000-771Sequence Read ArchiveSRP018525SRP018525_T28Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome4-cell embryo cell (4-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 147.3418
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 120.0230
3 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 73.0408
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 57.1810
5 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 56.2129
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 53.4803
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 51.4438
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 46.2867
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 41.2501
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 27.7858

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000276795 NA -0.0253
57166 ENSG00000276791 NA -0.0253
57165 ENSG00000276790 NA -0.0253
57164 ENSG00000276789 NA -0.0253
57163 ENSG00000276788 SNORD26 small nucleolar RNA, C/D box 26 -0.0253
57162 ENSG00000276786 NA -0.0253
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 27.7858
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 41.2501
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 46.2867
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 51.4438

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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