SHOGoiN Cell Transcriptome: GSM1160125

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160125


Profile download
7010000000000000000000-771Sequence Read ArchiveSRP018525SRP018525_T29Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome4-cell embryo cell (4-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 141.9433
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 124.4753
3 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 68.2030
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 60.0903
5 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 55.8994
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 54.3126
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 50.8989
8 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 49.6994
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 40.1755
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 29.9533

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.0213
57170 ENSG00000277047 NA -0.0213
57168 ENSG00000277043 EEF1A1P42 eukaryotic translation elongation factor 1 alpha 1 pseudogene 42 -0.0213
57167 ENSG00000277041 NA -0.0213
57166 ENSG00000277040 NA -0.0213
57165 ENSG00000277039 NA -0.0213
57164 ENSG00000277035 NA -0.0213
57163 ENSG00000277034 NA -0.0213
57162 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.0213
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 29.9533

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...