SHOGoiN Cell Transcriptome: GSM1160129

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160129


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T33Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 112.4503
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 111.4505
3 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 87.5540
4 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 76.0057
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 71.2294
6 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 68.9323
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 43.7506
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 40.2437
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.3808
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 32.5959

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276599 RNA5SP411 RNA, 5S ribosomal pseudogene 411 -0.0638
57170 ENSG00000276598 MIR6893 microRNA 6893 -0.0638
57169 ENSG00000276597 TRBV11-3 T cell receptor beta variable 11-3 -0.0638
57168 ENSG00000276596 NA -0.0638
57167 ENSG00000276593 NA -0.0638
57166 ENSG00000276588 RN7SL322P RNA, 7SL, cytoplasmic 322, pseudogene -0.0638
57164 ENSG00000276586 NA -0.0638
57162 ENSG00000276584 MIR6737 microRNA 6737 -0.0638
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 32.5959
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.3808

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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