SHOGoiN Cell Transcriptome: GSM1160130

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160130


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T34Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 143.0248
2 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 70.2942
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 69.6068
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 63.9799
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 60.5152
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 52.5106
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 41.1965
8 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 37.0843
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 29.5081
10 ENSG00000130255 RPL36 ribosomal protein L36 26.7302

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276822 NA -0.0709
57170 ENSG00000276819 TRBV15 T cell receptor beta variable 15 -0.0709
57166 ENSG00000276814 NA -0.0709
57162 ENSG00000276810 NA -0.0709
10 ENSG00000130255 RPL36 ribosomal protein L36 26.7302
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 29.5081
8 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 37.0843
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 41.1965
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 52.5106
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 60.5152

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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