SHOGoiN Cell Transcriptome: GSM1160131

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160131


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T35Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 133.6244
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 77.7921
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 65.4693
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 53.6988
5 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 52.8391
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 47.1610
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 44.8480
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 41.7846
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 36.0399
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 31.4394

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276556 NA -0.0975
57168 ENSG00000276548 NA -0.0975
57167 ENSG00000276547 PCDHGB5 protocadherin gamma subfamily B, 5 -0.0975
57166 ENSG00000276546 NA -0.0975
57165 ENSG00000276545 PCDHGB9P protocadherin gamma subfamily B, 9 pseudogene -0.0975
57164 ENSG00000276544 RN7SL453P RNA, 7SL, cytoplasmic 453, pseudogene -0.0975
57162 ENSG00000276542 NA -0.0975
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 31.4394
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 36.0399
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 41.7846

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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