SHOGoiN Cell Transcriptome: GSM1160132

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160132


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T36Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 102.6489
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 86.9049
3 ENSG00000273149 novel transcript, antisense to TPT1 49.8675
4 ENSG00000083845 RPS5 ribosomal protein S5 44.8817
5 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 41.4838
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 41.3595
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 38.3446
8 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 38.3407
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 37.7304
10 ENSG00000142534 RPS11 ribosomal protein S11 33.5559

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0866
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0866
58733 ENSG00000285992 novel transcript -0.0866
58732 ENSG00000285991 novel transcript -0.0866
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0866
58730 ENSG00000285989 TEC -0.0866
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0866
58728 ENSG00000285987 NA -0.0866
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0866
58726 ENSG00000285985 NA -0.0866

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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