SHOGoiN Cell Transcriptome: GSM1160134

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160134


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T38Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 142.0880
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 81.6723
3 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 73.6072
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 58.4672
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 57.5412
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 57.4871
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 50.7564
8 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 37.1111
9 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 30.5955
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 29.7316

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276668 NA -0.0714
57169 ENSG00000276664 NA -0.0714
57168 ENSG00000276663 NA -0.0714
57167 ENSG00000276662 NA -0.0714
57164 ENSG00000276656 MIR6083 microRNA 6083 -0.0714
57163 ENSG00000276653 RN7SL856P RNA, 7SL, cytoplasmic 856, pseudogene -0.0714
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 29.7316
9 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 30.5955
8 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 37.1111
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 50.7564

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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