SHOGoiN Cell Transcriptome: GSM1160136

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160136


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T40Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 159.0404
2 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 91.0725
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 86.4639
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 61.7697
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 59.0307
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 41.4507
7 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 32.1309
8 ENSG00000227615 NA 29.3008
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 24.8101
10 ENSG00000225972 MTND1P23 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 23 24.2424

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276807 NA -0.0476
57170 ENSG00000276805 NA -0.0476
57168 ENSG00000276800 NA -0.0476
57165 ENSG00000276795 NA -0.0476
57162 ENSG00000276791 NA -0.0476
10 ENSG00000225972 MTND1P23 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 23 24.2424
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 24.8101
8 ENSG00000227615 NA 29.3008
7 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 32.1309
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 41.4507

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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