SHOGoiN Cell Transcriptome: GSM1160137

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160137


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T41Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 159.8100
2 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 77.0502
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 71.6293
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 59.9068
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 58.1594
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 54.4338
7 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 52.2240
8 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 32.1349
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 28.2283
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 23.0668

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0489
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0489
58733 ENSG00000285992 novel transcript -0.0489
58732 ENSG00000285991 novel transcript -0.0489
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0489
58730 ENSG00000285989 TEC -0.0489
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0489
58728 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0489
58727 ENSG00000285985 NA -0.0489
58726 ENSG00000285984 novel transcript -0.0489

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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