SHOGoiN Cell Transcriptome: GSM1160137

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160137


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7010000000000000000000-772Sequence Read ArchiveSRP018525SRP018525_T41Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome8-cell embryo cell (8-cell embryo)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 155.8622
2 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 80.0631
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 76.6877
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 71.6864
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 64.3983
6 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 57.8839
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 56.3602
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 32.8962
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 31.3304
10 ENSG00000227615 NA 21.5071

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276292 NA -0.0519
57170 ENSG00000276289 KCNE1B potassium voltage-gated channel subfamily E regulatory subunit 1B -0.0519
57167 ENSG00000276282 NA -0.0519
57165 ENSG00000276278 NA -0.0519
57163 ENSG00000276272 NA -0.0519
57162 ENSG00000276270 MIR6799 microRNA 6799 -0.0519
10 ENSG00000227615 NA 21.5071
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 31.3304
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 32.8962
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 56.3602

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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