SHOGoiN Cell Transcriptome: GSM1160140

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1160140


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7010000000000000000000-773Sequence Read ArchiveSRP018525SRP018525_T44Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptomeMorula cell (Morula)HumanEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 150.9474
2 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 96.1847
3 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 72.2752
4 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 70.1713
5 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 62.2245
6 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 58.6960
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 41.4070
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 35.2459
9 ENSG00000248527 MTATP6P1 mitochondrially encoded ATP synthase 6 pseudogene 1 25.6359
10 ENSG00000234797 RPS3AP6 ribosomal protein S3A pseudogene 6 22.5407

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276626 NA -0.0504
57169 ENSG00000276622 MIR6499 microRNA 6499 -0.0504
57167 ENSG00000276620 NA -0.0504
57163 ENSG00000276612 NA -0.0504
57162 ENSG00000276610 SNORD64 small nucleolar RNA, C/D box 64 -0.0504
10 ENSG00000234797 RPS3AP6 ribosomal protein S3A pseudogene 6 22.5407
9 ENSG00000248527 MTATP6P1 mitochondrially encoded ATP synthase 6 pseudogene 1 25.6359
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 35.2459
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 41.4070
6 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 58.6960

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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