SHOGoiN Cell Transcriptome: GSM1268960

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268960


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T1Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 163.3027
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 80.4253
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 76.6511
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 45.7794
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 44.6077
6 ENSG00000120708 TGFBI transforming growth factor, beta-induced, 68kDa 32.0642
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 29.1411
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 27.6302
9 ENSG00000213639 PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 26.3289
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 22.4314

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0840
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0840
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0840
60672 ENSG00000283118 NA -0.0840
60671 ENSG00000283110 NA -0.0840
60670 ENSG00000283108 NA -0.0840
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0840
60668 ENSG00000283098 NA -0.0840
60667 ENSG00000283097 NA -0.0840
60666 ENSG00000283096 NA -0.0840

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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