SHOGoiN Cell Transcriptome: GSM1268960

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268960


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T1Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 163.3027
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 80.4253
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 76.6511
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 45.7794
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 44.6077
6 ENSG00000120708 TGFBI transforming growth factor beta induced 32.0642
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 29.1411
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 27.6302
9 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 26.3289
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 22.4314

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000276988 NA -0.0840
57168 ENSG00000276984 NA -0.0840
57167 ENSG00000276980 NA -0.0840
57165 ENSG00000276975 HYDIN2 HYDIN2, axonemal central pair apparatus protein (pseudogene) -0.0840
57164 ENSG00000276972 NA -0.0840
57163 ENSG00000276968 NA -0.0840
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 22.4314
9 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 26.3289
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 27.6302
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 29.1411

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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