SHOGoiN Cell Transcriptome: GSM1268962

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268962


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T3Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 83.2628
2 ENSG00000167601 AXL AXL receptor tyrosine kinase 73.3616
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 62.2229
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 54.2677
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 53.7059
6 ENSG00000075624 ACTB actin beta 44.3177
7 ENSG00000115414 FN1 fibronectin 1 40.9387
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 40.5560
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 36.7698
10 ENSG00000197061 HIST1H4C histone cluster 1 H4 family member c 34.3922

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276991 NA -0.1315
57168 ENSG00000276988 NA -0.1315
57166 ENSG00000276984 NA -0.1315
57165 ENSG00000276980 NA -0.1315
57163 ENSG00000276975 HYDIN2 HYDIN2, axonemal central pair apparatus protein (pseudogene) -0.1315
57162 ENSG00000276972 NA -0.1315
10 ENSG00000197061 HIST1H4C histone cluster 1 H4 family member c 34.3922
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 36.7698
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 40.5560
7 ENSG00000115414 FN1 fibronectin 1 40.9387

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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