SHOGoiN Cell Transcriptome: GSM1268964

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268964


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T4Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 85.0541
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 77.3085
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 66.8416
4 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 63.4092
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 53.2698
6 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 52.4568
7 ENSG00000115414 FN1 fibronectin 1 41.1883
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 41.0867
9 ENSG00000105974 CAV1 caveolin 1 34.6734
10 ENSG00000075624 ACTB actin beta 34.4363

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277041 NA -0.1257
57169 ENSG00000277040 NA -0.1257
57168 ENSG00000277039 NA -0.1257
57167 ENSG00000277035 NA -0.1257
57166 ENSG00000277034 NA -0.1257
57165 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.1257
57164 ENSG00000277030 MIR8071-2 microRNA 8071-2 -0.1257
57163 ENSG00000277029 RNU6-1192P RNA, U6 small nuclear 1192, pseudogene -0.1257
57162 ENSG00000277027 RMRP RNA component of mitochondrial RNA processing endoribonuclease -0.1257
10 ENSG00000075624 ACTB actin beta 34.4363

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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