SHOGoiN Cell Transcriptome: GSM1268966

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268966


Profile download
8000301-738Sequence Read ArchiveSRP033135SRP033135_T6Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 82.7753
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 76.5767
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 73.0360
4 ENSG00000115414 FN1 fibronectin 1 70.0269
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 48.1467
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 46.1912
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 38.5403
8 ENSG00000213639 PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 37.8663
9 ENSG00000105974 CAV1 caveolin 1, caveolae protein, 22kDa 37.5721
10 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 33.0251

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.1321
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.1321
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.1321
60672 ENSG00000283118 NA -0.1321
60671 ENSG00000283110 NA -0.1321
60670 ENSG00000283108 NA -0.1321
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.1321
60668 ENSG00000283098 NA -0.1321
60667 ENSG00000283097 NA -0.1321
60666 ENSG00000283096 NA -0.1321

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...