SHOGoiN Cell Transcriptome: GSM1268966

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268966


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T6Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 82.7753
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 76.5767
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 73.0360
4 ENSG00000115414 FN1 fibronectin 1 70.0269
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 48.1467
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 46.1912
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 38.5403
8 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 37.8663
9 ENSG00000105974 CAV1 caveolin 1 37.5721
10 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 33.0251

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277024 NA -0.1321
57168 ENSG00000277022 NA -0.1321
57166 ENSG00000277020 NA -0.1321
57165 ENSG00000277017 NA -0.1321
57164 ENSG00000277014 MIR3179-4 microRNA 3179-4 -0.1321
57163 ENSG00000277013 NA -0.1321
57162 ENSG00000277011 NA -0.1321
10 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 33.0251
9 ENSG00000105974 CAV1 caveolin 1 37.5721
8 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 37.8663

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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