SHOGoiN Cell Transcriptome: GSM1268967

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268967


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T7Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 183.1516
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 63.5100
3 ENSG00000167552 TUBA1A tubulin alpha 1a 60.8188
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 48.6548
5 ENSG00000124491 F13A1 coagulation factor XIII A chain 30.8618
6 ENSG00000155657 TTN titin 29.0631
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 27.8641
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 27.7441
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 26.6983
10 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 24.2801

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0745
57169 ENSG00000277081 NA -0.0745
57168 ENSG00000277077 NA -0.0745
57166 ENSG00000277073 MIR6131 microRNA 6131 -0.0745
57165 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.0745
57164 ENSG00000277066 NA -0.0745
57162 ENSG00000277063 MIR8084 microRNA 8084 -0.0745
10 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 24.2801
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 26.6983
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 27.7441

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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