SHOGoiN Cell Transcriptome: GSM1268968

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268968


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T8Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000167601 AXL AXL receptor tyrosine kinase 106.1807
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 78.0541
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 67.9674
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 67.3854
5 ENSG00000075624 ACTB actin beta 59.0621
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 56.4169
7 ENSG00000115414 FN1 fibronectin 1 39.9995
8 ENSG00000105974 CAV1 caveolin 1 34.5505
9 ENSG00000184009 ACTG1 actin gamma 1 29.3132
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 26.3859

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277040 NA -0.1183
57170 ENSG00000277039 NA -0.1183
57169 ENSG00000277035 NA -0.1183
57168 ENSG00000277034 NA -0.1183
57167 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.1183
57166 ENSG00000277030 MIR8071-2 microRNA 8071-2 -0.1183
57165 ENSG00000277029 RNU6-1192P RNA, U6 small nuclear 1192, pseudogene -0.1183
57164 ENSG00000277027 RMRP RNA component of mitochondrial RNA processing endoribonuclease -0.1183
57162 ENSG00000277024 NA -0.1183
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 26.3859

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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