SHOGoiN Cell Transcriptome: GSM1268969

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268969


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T9Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 112.1951
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 110.2592
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 46.0486
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 42.7928
5 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 39.4731
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 38.7932
7 ENSG00000106366 SERPINE1 serpin family E member 1 34.9055
8 ENSG00000075624 ACTB actin beta 32.3057
9 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 32.1217
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 31.9138

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277087 NA -0.1076
57170 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1076
57169 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1076
57167 ENSG00000277081 NA -0.1076
57166 ENSG00000277077 NA -0.1076
57165 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1076
57163 ENSG00000277073 MIR6131 microRNA 6131 -0.1076
57162 ENSG00000277067 uncharacterized LOC102724843 -0.1076
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 31.9138
9 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 32.1217

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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