SHOGoiN Cell Transcriptome: GSM1268970

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268970


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T10Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 119.8143
2 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 81.7720
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 68.1165
4 ENSG00000131711 MAP1B microtubule associated protein 1B 65.3149
5 ENSG00000118971 CCND2 cyclin D2 53.7045
6 ENSG00000075624 ACTB actin beta 51.3532
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 38.0234
8 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 28.7340
9 ENSG00000184009 ACTG1 actin gamma 1 28.0719
10 ENSG00000182718 ANXA2 annexin A2 26.1887

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277223 NA -0.0651
57169 ENSG00000277218 NA -0.0651
57168 ENSG00000277217 NA -0.0651
57166 ENSG00000277215 SPANXA2-OT1 SPANXA2 overlapping transcript 1 -0.0651
57165 ENSG00000277214 NA -0.0651
57164 ENSG00000277213 SDR42E1P2 short chain dehydrogenase/reductase family 42E, member 1 pseudogene 2 -0.0651
57162 ENSG00000277211 NA -0.0651
10 ENSG00000182718 ANXA2 annexin A2 26.1887
9 ENSG00000184009 ACTG1 actin gamma 1 28.0719
8 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 28.7340

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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