SHOGoiN Cell Transcriptome: GSM1268971

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268971


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T11Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 115.7062
2 ENSG00000115414 FN1 fibronectin 1 110.2634
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 80.7702
4 ENSG00000102265 TIMP1 TIMP metallopeptidase inhibitor 1 53.1990
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 52.7568
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 38.0612
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 33.6220
8 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 33.5539
9 ENSG00000167601 AXL AXL receptor tyrosine kinase 33.4689
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.4413

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277152 NA -0.0894
57170 ENSG00000277151 NA -0.0894
57169 ENSG00000277147 LINC00869 long intergenic non-protein coding RNA 869 -0.0894
57168 ENSG00000277146 NA -0.0894
57166 ENSG00000277144 NA -0.0894
57165 ENSG00000277143 NA -0.0894
57164 ENSG00000277142 LINC00235 long intergenic non-protein coding RNA 235 -0.0894
57163 ENSG00000277141 NA -0.0894
57162 ENSG00000277138 MIR6509 microRNA 6509 -0.0894
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.4413

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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