SHOGoiN Cell Transcriptome: GSM1268972

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268972


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T12Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 102.0867
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 90.2286
3 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 82.8417
4 ENSG00000115414 FN1 fibronectin 1 74.4087
5 ENSG00000120708 TGFBI transforming growth factor beta induced 45.6301
6 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 44.1841
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.0682
8 ENSG00000106366 SERPINE1 serpin family E member 1 40.3385
9 ENSG00000075624 ACTB actin beta 33.2797
10 ENSG00000167601 AXL AXL receptor tyrosine kinase 30.4391

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277056 NA -0.0931
57169 ENSG00000277052 MIR6763 microRNA 6763 -0.0931
57168 ENSG00000277051 NA -0.0931
57167 ENSG00000277050 NA -0.0931
57166 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.0931
57165 ENSG00000277047 NA -0.0931
57163 ENSG00000277041 NA -0.0931
57162 ENSG00000277040 NA -0.0931
10 ENSG00000167601 AXL AXL receptor tyrosine kinase 30.4391
9 ENSG00000075624 ACTB actin beta 33.2797

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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