SHOGoiN Cell Transcriptome: GSM1268974

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268974


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T13Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 106.6841
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 89.4119
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 71.5569
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 55.5962
5 ENSG00000115414 FN1 fibronectin 1 54.0962
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 52.4504
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 46.7759
8 ENSG00000075624 ACTB actin beta 43.0814
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 33.5753
10 ENSG00000197061 HIST1H4C histone cluster 1 H4 family member c 30.1723

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.1032
57170 ENSG00000277066 NA -0.1032
57168 ENSG00000277063 MIR8084 microRNA 8084 -0.1032
57167 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1032
57165 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1032
57164 ENSG00000277057 MIR6779 microRNA 6779 -0.1032
57163 ENSG00000277056 NA -0.1032
10 ENSG00000197061 HIST1H4C histone cluster 1 H4 family member c 30.1723
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 33.5753
8 ENSG00000075624 ACTB actin beta 43.0814

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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