SHOGoiN Cell Transcriptome: GSM1268977

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268977


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T15Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 86.9613
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 83.3882
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 73.5025
4 ENSG00000075624 ACTB actin beta 53.8151
5 ENSG00000115414 FN1 fibronectin 1 53.4998
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 53.2266
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 49.3171
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 34.5551
9 ENSG00000106366 SERPINE1 serpin family E member 1 33.2870
10 ENSG00000182718 ANXA2 annexin A2 28.6419

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277089 NA -0.1184
57169 ENSG00000277087 NA -0.1184
57168 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1184
57167 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1184
57165 ENSG00000277081 NA -0.1184
57164 ENSG00000277077 NA -0.1184
57163 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1184
10 ENSG00000182718 ANXA2 annexin A2 28.6419
9 ENSG00000106366 SERPINE1 serpin family E member 1 33.2870
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 34.5551

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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