SHOGoiN Cell Transcriptome: GSM1268977

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268977


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T15Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 86.9613
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 83.3882
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 73.5025
4 ENSG00000075624 ACTB actin, beta 53.8151
5 ENSG00000115414 FN1 fibronectin 1 53.4998
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 53.2266
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 49.3171
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH dehydrogenase 4 34.5551
9 ENSG00000106366 SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 33.2870
10 ENSG00000182718 ANXA2 annexin A2 28.6419

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.1184
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.1184
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.1184
60672 ENSG00000283118 NA -0.1184
60671 ENSG00000283110 NA -0.1184
60670 ENSG00000283108 NA -0.1184
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.1184
60668 ENSG00000283098 NA -0.1184
60667 ENSG00000283097 NA -0.1184
60666 ENSG00000283096 NA -0.1184

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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