SHOGoiN Cell Transcriptome: GSM1268979

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268979


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T17Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000167601 AXL AXL receptor tyrosine kinase 91.1808
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 88.8379
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 85.1013
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 66.7089
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 48.4021
6 ENSG00000075624 ACTB actin beta 44.7937
7 ENSG00000105974 CAV1 caveolin 1 36.2431
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 35.1914
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 34.7211
10 ENSG00000258017 NA 30.3860

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277056 NA -0.1140
57169 ENSG00000277053 GTF2IP1 general transcription factor IIi pseudogene 1 -0.1140
57168 ENSG00000277052 MIR6763 microRNA 6763 -0.1140
57167 ENSG00000277051 NA -0.1140
57166 ENSG00000277050 NA -0.1140
57165 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.1140
57164 ENSG00000277047 NA -0.1140
57162 ENSG00000277041 NA -0.1140
10 ENSG00000258017 NA 30.3860
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 34.7211

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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