SHOGoiN Cell Transcriptome: GSM1268981

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268981


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T19Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 222.0675
2 ENSG00000105640 RPL18A ribosomal protein L18a 62.1620
3 ENSG00000126432 PRDX5 peroxiredoxin 5 22.1856
4 ENSG00000075624 ACTB actin, beta 17.7438
5 ENSG00000125977 EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 17.7438
6 ENSG00000033050 ABCF2 ATP-binding cassette, sub-family F (GCN20), member 2 13.3020
7 ENSG00000149925 ALDOA aldolase A, fructose-bisphosphate 13.3020
8 ENSG00000184009 ACTG1 actin gamma 1 13.3020
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 13.3020
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 13.3020

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0235
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0235
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0235
60672 ENSG00000283118 NA -0.0235
60671 ENSG00000283117 NA -0.0235
60670 ENSG00000283110 NA -0.0235
60669 ENSG00000283108 NA -0.0235
60668 ENSG00000283103 NA -0.0235
60667 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0235
60666 ENSG00000283098 NA -0.0235

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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