SHOGoiN Cell Transcriptome: GSM1268985

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268985


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T21Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 76.5409
2 ENSG00000167601 AXL AXL receptor tyrosine kinase 75.6430
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 75.4533
4 ENSG00000115414 FN1 fibronectin 1 66.7520
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 62.9704
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 55.9891
7 ENSG00000075624 ACTB actin beta 44.5939
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 39.9018
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 33.6161
10 ENSG00000184009 ACTG1 actin gamma 1 32.0225

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277063 MIR8084 microRNA 8084 -0.1142
57170 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1142
57168 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1142
57167 ENSG00000277057 MIR6779 microRNA 6779 -0.1142
57166 ENSG00000277056 NA -0.1142
57164 ENSG00000277052 MIR6763 microRNA 6763 -0.1142
57163 ENSG00000277051 NA -0.1142
57162 ENSG00000277050 NA -0.1142
10 ENSG00000184009 ACTG1 actin gamma 1 32.0225
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 33.6161

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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