SHOGoiN Cell Transcriptome: GSM1268987

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268987


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T23Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 216.3452
2 ENSG00000105640 RPL18A ribosomal protein L18a 79.8222
3 ENSG00000120708 TGFBI transforming growth factor, beta-induced, 68kDa 18.0005
4 ENSG00000167601 AXL AXL receptor tyrosine kinase 18.0005
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 18.0005
6 ENSG00000103197 TSC2 tuberous sclerosis 2 15.4246
7 ENSG00000213639 PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 15.4246
8 ENSG00000126432 PRDX5 peroxiredoxin 5 12.8487
9 ENSG00000164111 ANXA5 annexin A5 12.8487
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 12.8487

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0309
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0309
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0309
60672 ENSG00000283118 NA -0.0309
60671 ENSG00000283117 NA -0.0309
60670 ENSG00000283110 NA -0.0309
60669 ENSG00000283108 NA -0.0309
60668 ENSG00000283103 NA -0.0309
60667 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0309
60666 ENSG00000283098 NA -0.0309

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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