SHOGoiN Cell Transcriptome: GSM1268988

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268988


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T24Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 94.1517
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 88.3696
3 ENSG00000115414 FN1 fibronectin 1 83.0254
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 62.6089
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 49.1878
6 ENSG00000167601 AXL AXL receptor tyrosine kinase 47.4310
7 ENSG00000075624 ACTB actin beta 43.8594
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 38.1934
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 34.6640
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.2243

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277095 NA -0.1022
57169 ENSG00000277089 NA -0.1022
57168 ENSG00000277087 NA -0.1022
57167 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1022
57166 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1022
57164 ENSG00000277081 NA -0.1022
57163 ENSG00000277077 NA -0.1022
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.2243
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 34.6640
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 38.1934

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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