SHOGoiN Cell Transcriptome: GSM1268992

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268992


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T28Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 116.8240
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 70.4361
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 59.9724
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 56.4467
5 ENSG00000085063 CD59 CD59 molecule (CD59 blood group) 44.5139
6 ENSG00000184009 ACTG1 actin gamma 1 39.1855
7 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 34.3860
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 31.9159
9 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 31.0261
10 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 30.7533

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277120 MIR6089 microRNA 6089 -0.0796
57170 ENSG00000277119 NA -0.0796
57169 ENSG00000277118 NA -0.0796
57168 ENSG00000277117 ICOS ligand -0.0796
57165 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.0796
57164 ENSG00000277109 NA -0.0796
57163 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.0796
10 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 30.7533
9 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 31.0261
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 31.9159

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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