SHOGoiN Cell Transcriptome: GSM1268993

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268993


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T29Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 215.4915
2 ENSG00000105640 RPL18A ribosomal protein L18a 65.9466
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 30.7596
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 26.3612
5 ENSG00000167601 AXL AXL receptor tyrosine kinase 21.9628
6 ENSG00000096384 HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 13.1661
7 ENSG00000135404 CD63 CD63 molecule 13.1661
8 ENSG00000183199 HSP90AB3P heat shock protein 90kDa alpha (cytosolic), class B member 3, pseudogene 13.1661
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 13.1661
10 ENSG00000197956 S100A6 S100 calcium binding protein A6 13.1661

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0291
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0291
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0291
60672 ENSG00000283118 NA -0.0291
60671 ENSG00000283117 NA -0.0291
60670 ENSG00000283110 NA -0.0291
60669 ENSG00000283108 NA -0.0291
60668 ENSG00000283103 NA -0.0291
60667 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0291
60666 ENSG00000283098 NA -0.0291

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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