SHOGoiN Cell Transcriptome: GSM1268994
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1268994 Profile download | 6000003010000000000000-738 | Sequence Read Archive | SRP033135 | SRP033135_T30 | Pseudo-temporal ordering of individual cells reveals regulators of differentiation | Transcriptome | Myoblast_T0 (Skeletal muscle) | Human | Muscle | RNA-seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000115414 | FN1 | fibronectin 1 | 147.0634 |
| 2 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S RNA | 95.3967 |
| 3 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 83.0130 |
| 4 | ENSG00000231991 | ANXA2P2 | annexin A2 pseudogene 2 | 46.8177 |
| 5 | ENSG00000251562 | MALAT1 | metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) | 39.5843 |
| 6 | ENSG00000167601 | AXL | AXL receptor tyrosine kinase | 39.1064 |
| 7 | ENSG00000198712 | MT-CO2 | mitochondrially encoded cytochrome c oxidase II | 38.1058 |
| 8 | ENSG00000245532 | NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) | 31.3544 |
| 9 | ENSG00000198886 | MT-ND4 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 | 24.7296 |
| 10 | ENSG00000198938 | MT-CO3 | mitochondrially encoded cytochrome c oxidase III | 23.8678 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 57170 | ENSG00000277099 | NA | -0.0827 | |
| 57168 | ENSG00000277096 | NA | -0.0827 | |
| 57167 | ENSG00000277095 | NA | -0.0827 | |
| 57165 | ENSG00000277089 | NA | -0.0827 | |
| 57164 | ENSG00000277087 | NA | -0.0827 | |
| 57163 | ENSG00000277084 | RNU2-4P | RNA, U2 small nuclear 4, pseudogene | -0.0827 |
| 57162 | ENSG00000277083 | PRSS3P3 | PRSS3 pseudogene 3 | -0.0827 |
| 10 | ENSG00000198938 | MT-CO3 | mitochondrially encoded cytochrome c oxidase III | 23.8678 |
| 9 | ENSG00000198886 | MT-ND4 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 | 24.7296 |
| 8 | ENSG00000245532 | NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) | 31.3544 |
