SHOGoiN Cell Transcriptome: GSM1268994

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268994


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T30Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 147.0634
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 95.3967
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 83.0130
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 46.8177
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 39.5843
6 ENSG00000167601 AXL AXL receptor tyrosine kinase 39.1064
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 38.1058
8 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 31.3544
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 24.7296
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 23.8678

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277099 NA -0.0827
57168 ENSG00000277096 NA -0.0827
57167 ENSG00000277095 NA -0.0827
57165 ENSG00000277089 NA -0.0827
57164 ENSG00000277087 NA -0.0827
57163 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.0827
57162 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0827
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 23.8678
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 24.7296
8 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 31.3544

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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