SHOGoiN Cell Transcriptome: GSM1268996

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268996


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T32Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 85.9275
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 82.1238
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 79.0824
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 54.3748
5 ENSG00000115414 FN1 fibronectin 1 51.8111
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 51.5849
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 36.8977
8 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 35.3812
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 34.0742
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 31.5272

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276998 REXO1L2P REXO1 like 2, pseudogene -0.1176
57169 ENSG00000276993 NA -0.1176
57168 ENSG00000276992 NA -0.1176
57167 ENSG00000276991 NA -0.1176
57164 ENSG00000276988 NA -0.1176
57162 ENSG00000276984 NA -0.1176
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 31.5272
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 34.0742
8 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 35.3812
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 36.8977

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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