SHOGoiN Cell Transcriptome: GSM1268999

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268999


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T35Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 56.6196
2 ENSG00000075624 ACTB actin beta 37.7302
3 ENSG00000102265 TIMP1 TIMP metallopeptidase inhibitor 1 37.7302
4 ENSG00000258017 novel transcript, antisense to TUBA1B 37.7302
5 ENSG00000260032 NORAD non-coding RNA activated by DNA damage 37.7302
6 ENSG00000003756 RBM5 RNA binding motif protein 5 18.8408
7 ENSG00000005022 SLC25A5 solute carrier family 25 member 5 18.8408
8 ENSG00000021574 SPAST spastin 18.8408
9 ENSG00000023287 RB1CC1 RB1 inducible coiled-coil 1 18.8408
10 ENSG00000023572 GLRX2 glutaredoxin 2 18.8408

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0486
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0486
58733 ENSG00000285992 novel transcript -0.0486
58732 ENSG00000285991 novel transcript -0.0486
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0486
58730 ENSG00000285989 TEC -0.0486
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0486
58728 ENSG00000285987 NA -0.0486
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0486
58726 ENSG00000285985 NA -0.0486

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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