SHOGoiN Cell Transcriptome: GSM1268999

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268999


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T35Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 220.9492
2 ENSG00000105640 RPL18A ribosomal protein L18a 77.3164
3 ENSG00000149925 ALDOA aldolase, fructose-bisphosphate A 18.3901
4 ENSG00000033050 ABCF2 ATP binding cassette subfamily F member 2 14.7072
5 ENSG00000075624 ACTB actin beta 14.7072
6 ENSG00000126432 PRDX5 peroxiredoxin 5 14.7072
7 ENSG00000147548 NSD3 nuclear receptor binding SET domain protein 3 11.0243
8 ENSG00000258017 NA 11.0243
9 ENSG00000072110 ACTN1 actinin alpha 1 7.3414
10 ENSG00000100097 LGALS1 galectin 1 7.3414

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277368 NA -0.0244
57170 ENSG00000277367 NA -0.0244
57169 ENSG00000277363 SRCIN1 SRC kinase signaling inhibitor 1 -0.0244
57167 ENSG00000277358 NA -0.0244
57166 ENSG00000277357 NPAP1P7 nuclear pore associated protein 1 pseudogene 7 -0.0244
57164 ENSG00000277352 NA -0.0244
57163 ENSG00000277351 NA -0.0244
57162 ENSG00000277350 NA -0.0244
10 ENSG00000100097 LGALS1 galectin 1 7.3414
9 ENSG00000072110 ACTN1 actinin alpha 1 7.3414

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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