SHOGoiN Cell Transcriptome: GSM1268999

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1268999


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T35Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 220.9492
2 ENSG00000105640 RPL18A ribosomal protein L18a 77.3164
3 ENSG00000149925 ALDOA aldolase A, fructose-bisphosphate 18.3901
4 ENSG00000033050 ABCF2 ATP-binding cassette, sub-family F (GCN20), member 2 14.7072
5 ENSG00000075624 ACTB actin, beta 14.7072
6 ENSG00000126432 PRDX5 peroxiredoxin 5 14.7072
7 ENSG00000147548 WHSC1L1 Wolf-Hirschhorn syndrome candidate 1-like 1 11.0243
8 ENSG00000258017 NA 11.0243
9 ENSG00000072110 ACTN1 actinin, alpha 1 7.3414
10 ENSG00000100097 LGALS1 lectin, galactoside-binding, soluble, 1 7.3414

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0244
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0244
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0244
60672 ENSG00000283118 NA -0.0244
60671 ENSG00000283117 NA -0.0244
60670 ENSG00000283110 NA -0.0244
60669 ENSG00000283108 NA -0.0244
60668 ENSG00000283103 NA -0.0244
60667 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0244
60666 ENSG00000283098 NA -0.0244

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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