SHOGoiN Cell Transcriptome: GSM1269000

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269000


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T36Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 117.2731
2 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 75.3577
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 73.7390
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 58.5561
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 57.3198
6 ENSG00000120708 TGFBI transforming growth factor, beta-induced, 68kDa 49.8206
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 35.6689
8 ENSG00000105974 CAV1 caveolin 1, caveolae protein, 22kDa 31.8510
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.2090
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.6079

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0995
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0995
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0995
60672 ENSG00000283118 NA -0.0995
60671 ENSG00000283110 NA -0.0995
60670 ENSG00000283108 NA -0.0995
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0995
60668 ENSG00000283098 NA -0.0995
60667 ENSG00000283097 NA -0.0995
60666 ENSG00000283096 NA -0.0995

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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