SHOGoiN Cell Transcriptome: GSM1269000

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269000


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T36Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 117.2731
2 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 75.3577
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 73.7390
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 58.5561
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 57.3198
6 ENSG00000120708 TGFBI transforming growth factor beta induced 49.8206
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 35.6689
8 ENSG00000105974 CAV1 caveolin 1 31.8510
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.2090
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.6079

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277109 NA -0.0995
57170 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.0995
57167 ENSG00000277103 NA -0.0995
57164 ENSG00000277099 NA -0.0995
57162 ENSG00000277096 NA -0.0995
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.6079
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.2090
8 ENSG00000105974 CAV1 caveolin 1 31.8510
7 ENSG00000167601 AXL AXL receptor tyrosine kinase 35.6689
6 ENSG00000120708 TGFBI transforming growth factor beta induced 49.8206

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...