SHOGoiN Cell Transcriptome: GSM1269001

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269001


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T37Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 104.9905
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 89.0939
3 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 64.7359
4 ENSG00000167601 AXL AXL receptor tyrosine kinase 56.3039
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 52.5162
6 ENSG00000115414 FN1 fibronectin 1 40.5771
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 37.0700
8 ENSG00000075624 ACTB actin beta 32.0049
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 29.1328
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 28.2615

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277109 NA -0.1131
57170 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1131
57167 ENSG00000277103 NA -0.1131
57164 ENSG00000277099 NA -0.1131
57162 ENSG00000277096 NA -0.1131
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 28.2615
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 29.1328
8 ENSG00000075624 ACTB actin beta 32.0049
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 37.0700
6 ENSG00000115414 FN1 fibronectin 1 40.5771

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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