SHOGoiN Cell Transcriptome: GSM1269004

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269004


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T40Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000102265 TIMP1 TIMP metallopeptidase inhibitor 1 88.8426
2 ENSG00000182718 ANXA2 annexin A2 86.6685
3 ENSG00000115414 FN1 fibronectin 1 86.3006
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 63.6901
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 51.0068
6 ENSG00000075624 ACTB actin beta 50.4649
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 50.2843
8 ENSG00000125148 MT2A metallothionein 2A 46.7121
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 42.3104
10 ENSG00000146197 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 41.4207

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0809
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0809
58733 ENSG00000285992 novel transcript -0.0809
58732 ENSG00000285991 novel transcript -0.0809
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0809
58730 ENSG00000285989 TEC -0.0809
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0809
58728 ENSG00000285987 NA -0.0809
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0809
58726 ENSG00000285985 NA -0.0809

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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