SHOGoiN Cell Transcriptome: GSM1269006

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269006


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T41Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 105.3013
2 ENSG00000115414 FN1 fibronectin 1 87.1667
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 80.1656
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 62.6306
5 ENSG00000167601 AXL AXL receptor tyrosine kinase 59.6071
6 ENSG00000075624 ACTB actin beta 48.3512
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 44.8249
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 32.5568
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 32.4537
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 31.5318

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277087 NA -0.1021
57170 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1021
57169 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1021
57167 ENSG00000277081 NA -0.1021
57166 ENSG00000277077 NA -0.1021
57165 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1021
57163 ENSG00000277073 MIR6131 microRNA 6131 -0.1021
57162 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.1021
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 31.5318
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 32.4537

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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